Cursor Keeps Breaking My Working Code: How to Stop the Drift

Cursor feels like a genius until it rewrites files you never mentioned. Use this starter kit to keep it helpful past 50k lines.

Cursor is the default co-pilot for most builders we meet. It’s fast, context-aware, and wildly capable. It’s also the reason so many large AI-built apps land in triage. Put Cursor on a 50,000-line repo with no boundaries and it acts like an excited junior engineer: eager to help, unaware of consequences.

Here’s the hardened workflow we recommend when Cursor keeps “fixing” the wrong files.

The Pattern: Change A, Break B #

  • You ask Cursor to update onboarding copy.
  • Cursor scans your React tree, updates prop names “for consistency,” and rewrites the analytics hook.
  • Checkout fails because the analytics hook now emits a different event name.

Repeat this a dozen times and you’re convinced Cursor is sabotaging you. In reality, it’s doing exactly what you asked—just without constraints.

Why Cursor Does This (for Large Projects) #

  1. Full-project visibility: Cursor indexes your entire repo. When it receives a prompt, it proactively aligns related files.
  2. Heuristic refactors: It optimizes patterns (renaming variables, extracting functions) even if you only asked for a small change.
  3. Lack of "do-not-touch" markers: Unless you specify safe zones, Cursor assumes everything is fair game.
  4. Prompts without exit criteria: "Make sure this works" invites the model to chase ripple effects indefinitely.

🎯 Give Cursor Complete Project Understanding

Giga automatically generates context rules so Cursor understands your entire codebase structure. Stop unexpected file changes and breaks.

Try Giga →

Step 1: Install Guardrails in Cursor #

1. Define Workspace Rules #

In .cursorrules (or the Workspace Prompt), add:

You may only modify the following paths unless explicitly instructed otherwise:
- app/(marketing)/**
- app/api/onboarding/**
If you believe another path must change, stop and ask.

Keep the list tight. Expand only when necessary.

2. Label No-Go Zones #

Add code comments like:

// 🚫 DO NOT MODIFY: Critical billing logic. Ask before touching.

Cursor respects explicit language. Make it loud.

3. Limit Diff Radius #

Use Cursor’s settings to cap maximum file changes per diff. If a change requires more files, break it into separate prompts.

Step 2: Change How You Prompt #

1. Scope Before You Code #

Prompt template:

Step 1: Describe the current behavior of <component>.
Step 2: List the files you expect to touch.
Step 3: Wait for confirmation before writing code.

This forces Cursor to verbalize intent. You approve or redirect before any diff exists.

2. Demand Post-Change Reports #

After a diff, ask:

Summarize exactly what changed, file by file. Mention tests updated and implications.

Compare the summary to the diff. Anything unexpected? Reject.

3. Scripted Smoke Tests #

Require Cursor to update scripts/run-smoke.ts whenever it edits critical flows. If it claims tests pass, ask for the command output.

Step 3: Restructure Your Repo for Cursor-Friendliness #

1. Decouple Modules #

Split monolithic directories into bounded contexts. Cursor is less likely to drift if React, API routes, workers, and prompts live in clearly separated folders.

2. Introduce Public Interfaces #

Wrap critical logic behind exported functions. Cursor will respect module boundaries if public APIs are obvious and well-documented.

3. Document Contracts #

Add README files per domain explaining invariants. Cursor often leaves these alone when they’re explicit.

Step 4: Automate Drift Detection #

  • Git Hooks: Fail commits that touch banned directories without a #cursor-approved tag.
  • CI Scripts: Compare file lists between prompts and diffs.
  • Observability: Trigger alerts when key metrics change unexpectedly after a merge.

Step 5: Blend Cursor with Human Oversight #

  • Schedule weekly “Cursor Review” sessions to analyze where it helped or hurt.
  • Pair Cursor with Claude or ChatGPT to cross-check diff reasoning.
  • Keep a changelog of major guardrail updates.

Workarounds Founders Use (and Whether They Work) #

WorkaroundWhat It HelpsRisk
Copying files to a scratch repoLimits blast radiusDrift reappears when merging back
Freezing entire directoriesPrevents unwanted editsSlows progress if overused
Switching toolsFresh model biasesTool-hopping without guardrails burns time

The best solution isn’t abandoning Cursor; it’s taming it.

The Automated Approach: Use Giga #

Instead of manually maintaining workspace rules and documentation, Giga automatically:

  • Generates project-specific context rules that update as you code
  • Creates persistent AI memory of your codebase structure
  • Helps Cursor understand which files connect to which features
  • Prevents cascade failures from changes spreading unexpectedly
  • Works with Cursor, VSCode, Claude Code, and other AI tools

Setup (5 minutes):

npm install -g giga-cli
giga init
giga connect cursor

What changes:

  • Cursor understands your full project architecture
  • AI changes only the files relevant to your request
  • No more surprise breaks in unrelated features
  • Self-learning memory improves over time

Keep Cursor on Your Side #

Manual approach: Ship context documentation and READMEs so Cursor knows the architecture.

Automated approach: Use Giga to maintain complete project understanding automatically.

Either way, track prompt changes in version control and let automated tests catch regressions.

🚀 Stop Cursor From Breaking Working Code

Giga gives Cursor persistent understanding of your entire codebase. Install in 5 minutes and ship without surprise regressions.

Try Giga →

Once Cursor has complete project visibility (whether through manual rules or Giga), it becomes incredibly powerful. You'll ship faster and stay in control.